Protein ZmNAC88
ZmNAC88 is a protein in the NAC family.
Information
TF Name: ZmNAC88
Species: Maize
TF Family: NAC
Gene Name(Synonym): NACTF88
Uniprot ID: K7VFK4

Protein ZmNAC88

ZmNAC88 is a protein in the NAC family.

Overview of domains present in v5 transcripts
PF02365
Zm00001eb349120_T002
Zm00001eb349120_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d010239DAPseq no logo sequence fimo position
Zm00001d010239DAPseq no logo sequence fimo position
Zm00001d010239ChIPseq no logo sequence fimo position
Zm00001d010239PChIPseq no logo sequence fimo position

Interactions where ZmNAC88 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmNAC88 is the target  
Expand


There are 108 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb349120_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02365
PF02365
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

TTTCATCATCAGTCGTGCGAGCACC...

GRMZM2G134687_T01 from maize genome v3


Related TFome: pUT4782

Amino Acid Sequence
Copy to clipboard

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSP
SPSSTPLSPTQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAF
ASSYSLFNMAAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVA
DKLSWDWNQIPDTTGRDYNNTSGFK

Nucleotide Sequence
Copy to clipboard
     
Expand

CGCCTCGCACCCCCCGGCCCAAATT...

Zm00001d010239_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELIAFLDLY
RFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSGKAPKGVRSS
WIMNEYRLPPPPTDADPFIPKSEISLCRVYKRSGIDDTHGQSSSSTQFASSARRTSSRTGAPTVIRHGSSPSPSSTPLSP
TQQLSSFHLLQGECSSASPPAPMMDQVVTVHSAPQQLLTHPSPCTYAPATTISISTAEAVPEWAQGAEAAFASSYSLFNM
AAAAGPMAAGSSRSSVDELSTLVGHSQAYANLSAATGGHLLPLLTPPPPPMLQTMPLGALPIVAPPSSSVADKLSWDWNQ
IPDTTGRDYNNTSGFK

Nucleotide Sequence
Copy to clipboard
     
Expand

CTCTTCTCCCACTCGCGCGCCTCGC...

Zm00001eb349120_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MSGDLDDGHGAAAVGNVVAAAAGGEAAAEVAVGAGAAAREAAVDAHDNDVVMPGFRFHPTEEELIEFYLRRKVEGKRFNV
ELIAFLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSG
KAPKGVRSSWIMNEYRLPPPPTDADPFIPKIYTS

Nucleotide Sequence
Copy to clipboard
     
Expand

GGACCAAAAACCTCCACTCCAGTAT...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26